Publicly available NCCR databases and computing tools:

MicrobeAtlas database for the 16S ribosomal RNA gene
mOTUs profiling tool for metagenomic and metatranscriptomic samples
zDB genomics database for the analysis of clinically relevant strains
mBARq  Quantitative analysis of barcoded sequencing data
NICEgame missing metabolic capabilities in genome-scale metabolic models
ATLASx of biochemical reactions and pathways for synthetic biologists and metabolic engineers
CROMICS framework with biophysical details