Publications

The microbiota conditions a gut milieu that selects for wild-type Salmonella Typhimurium virulence
Gül, E., Hardt, W.-D., et al. (2023).
https://doi.org/10.1371/journal.pbio.3002253
Differences in carbon metabolic capacity fuel co-existence and plasmid transfer between Salmonella strains in the mouse gut
Gül, E., Younes, A. A., Huuskonen, J., Diawara, C., Nguyen, B., Hardt, W.-D., et al. (2023).
https://doi.org/10.1016/j.chom.2023.05.029
Mouse models for bacterial enteropathogen infections: insights into the role of colonization resistance
Herzog, M., Cazzaniga, M., Peters, A., Shayya, N., Beldi, L., Hapfelmeier, S., Hardt, W.-D., et al. (2023).
https://doi.org/10.1080/19490976.2023.2172667
Fitness advantage of Bacteroides thetaiotaomicron capsular polysaccharide in the mouse gut depends on the resident microbiota
Hoces, D., Greter, G., Arnoldini, M., Stäubli, M., Moresi, C., Sintsova, A., Slack, E., et al. (2023).
https://doi.org/10.7554/eLife.81212
Chemotaxis and autoinducer-2 signalling mediate colonization and contribute to co-existence of Escherichia coli strains in the murine gut
Laganenka, L., Lee, J.-W., Malfertheiner, L., Dieterich, C. L., Fuchs, L., Piel, J., von Mering, C., Sourjik, V., Hardt, W.-D. (2023).
https://doi.org/10.1038/s41564-022-01286-7
Metabolic reconstitution of germ-free mice by a gnotobiotic microbiota varies over the circadian cycle
Hoces, D., Lan, J., Sun, W., Geiser, T., Stäubli, M., Barazzone, E., Arnoldini, M., Challa, T.D., Klug, M., Kellenberger, A., Nowok, S., Faccin, E., Macpherson, A.J., Stecher, B., Sunagawa, S., Zenobi, R., Hardt, W.-D., Wolfrum, C., Slack, E. (2022).
https://doi.org/10.1371/journal.pbio.3001743
Microbiota-derived metabolites inhibit Salmonella virulent subpopulation development by acting on single-cell behaviors
Hockenberry, A. M., Micali, G., Takàcs, G., Weng, J., Hardt, W.-D., Ackermann, M. (2021).
https://doi.org/10.1073/pnas.2103027118
A rationally designed oral vaccine induces immunoglobulin A in the murine gut that directs the evolution of attenuated Salmonella variants
Diard, M., Bakkeren, E., [...], Hardt, W.-D., Slack, E. (2021).
https://doi.org/10.1038/s41564-021-00911-1
High throughput sequencing provides exact genomic locations of inducible prophages and accurate phage-to-host ratios in gut microbial strains
Zünd, M., Ruscheweyh, H.-J., Field, C. M., Meyer, N., Cuenca, M., Hoces, D., Hardt, W.-D., Sunagawa, S. (2021).
https://doi.org/10.1186/s40168-021-01033-w
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