Publications

Salmonella Typhimurium screen identifies shifts in mixed-acid fermentation during gut colonization
Nguyen, B. D., Sintsova, A., Schubert, C., Slack, E., Vorholt, J, Sunagawa, S., Hardt, W.-D., et al. (2024).
https://doi.org/10.1016/j.chom.2024.08.015
Non-canonical start codons confer context-dependent advantages in carbohydrate utilization for commensal E. coli in the murine gut
Cherrak, Y., Salazar, M. A., Näpflin, N., Malfertheiner, L., Herzog, M., Schubert, C., Von Mering., C., Hardt, W.-D. (2024).
https://doi.org/10.1038/s41564-024-01775-x
Commensal E. coli limits Salmonella gut invasion during inflammation by producing toxin-bound siderophores in a tonB-dependent manner
Cherrak, Y., Salazar, M. A., Yilmaz, K., Kreuzer, M., Hardt, W.-D. (2024).
https://doi.org/10.1371/journal.pbio.3002616
Assessing microbiome population dynamics using wild-type isogenic standardized hybrid (WISH)-tags
Daniel, B. B. J., Steiger, Y., Sintsova, A., Field, C. M., Nguyen, B. D., Schubert, C., Cherrak, Y., Sunagawa, S., Hardt, W.-D., Vorholt, J. A. (2024).
https://doi.org/10.1038/s41564-024-01634-9
mBARq: a versatile and user-friendly framework for the analysis of DNA barcodes from transposon insertion libraries, knockout mutants, and isogenic strain populations
Sintsova, A., Ruscheweyh, H.-J., Field, C. M., Feer, L., Nguyen, B., Daniel, B., Hardt, W.-D., Vorholt, J. A., Sunagawa, S. (2024).
https://doi.org/10.1093/bioinformatics/btae078
From microbiome composition to functional engineering, one step at a time
Burz, S. D., Causevic, S., Dal Co, A., Dmitrijeva, M., Vonaesch, P., Vorholt, J., et al. (2023).
https://doi.org/10.1128/mmbr.00063-23
The microbiota conditions a gut milieu that selects for wild-type Salmonella Typhimurium virulence
Gül, E., Hardt, W.-D., et al. (2023).
https://doi.org/10.1371/journal.pbio.3002253
Differences in carbon metabolic capacity fuel co-existence and plasmid transfer between Salmonella strains in the mouse gut
Gül, E., Younes, A. A., Huuskonen, J., Diawara, C., Nguyen, B., Hardt, W.-D., et al. (2023).
https://doi.org/10.1016/j.chom.2023.05.029
Mouse models for bacterial enteropathogen infections: insights into the role of colonization resistance
Herzog, M., Cazzaniga, M., Peters, A., Shayya, N., Beldi, L., Hapfelmeier, S., Hardt, W.-D., et al. (2023).
https://doi.org/10.1080/19490976.2023.2172667
Load more
THEMES
AUTHORS