Publications

LCMSpector: A simple open-source viewer for targeted hyphenated mass spectrometry analysis
Fido, M., Hoesli, E., Cappio Barazzone, E., Zenobi, R., Slack E. (2025).
https://doi.org/10.1371/journal.pcbi.1013095
Evaluating long-term stool preservation methods for maximizing the recovery of viable human fecal microbiota
Teo, Y., Lavrinienko, A., Albertos Torres, D., Asare, P.T., Ruder, A., Dominguez-Bello, M.G., Egli, A., Bokulich, N.A., Vonaesch, P. (2025).
https://doi.org/10.1080/29933935.2025.2594958
From global to local: rethinking the design of probiotic intervention strategies
Vonaesch, P., Garenau, J., Dominguez-Bello, M.G. (2025).
https://doi.org/10.1016/j.tim.2025.11.009
One Health, One Microbiome
Muhummed, A.M., Lanker, K.C., Yersin, S., Zinsstag, J., Vonaesch, P. (2025).
https://doi.org/10.1038/s41467-025-64115-5
Blood metabolomics improves prediction of central nervous system damage in multiple sclerosis
Rebeaud, J., Phillips, N.E., Thévoz, G., Vigne, S., Nassirnia, S., Gauthier-Jaques, A., Lim-Dubois-Ferriere, P., Panda, S., Théaudin, M., Du Pasquier, R., Greub, G., Bertelli, C., Kuhle, J., Collet, T.-H. (2025).
https://doi.org/10.1007/s11306-025-02315-2
Quantifying the varying harvest of fermentation products from the human gut microbiota
Arnoldini, M., Sharma, R., Moresi, C., Chure, G., Chabbey, J., Slack, E., Cremer, J. (2025).
https://doi.org/10.1016/j.cell.2025.07.005
Microbial and antimicrobial resistance diagnostics by gas sensors and machine learning
Berk, M.B., Shin, H., Jutzeler, C.R., Kessler, T.M., Slack, E., Egli, A., Güntner, A.T. (2025).
https://doi.org/10.1016/j.celbio.2025.100125
zDB: bacterial comparative genomics made easy
Marquis, B., Pillonel, T., Carrara, A., Bertelli, C. (2024).
https://doi.org/10.1128/msystems.00473-24
Environmental and geographical factors influencing the spread of SARS-CoV-2 over 2 years: a fine-scale spatiotemporal analysis
De Ridder, D., Ladoy, A., Choi, Y., Jacot, D., Vuilleumier, S., Guessous, I., Joost, S., Greub, G. (2024).
https://doi.org/10.3389/fpubh.2024.1298177
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