Publications

Root and microbial contributions to anoxic microsite formation in the rhizosphere: a microfluidic approach
Lacroix, E.M., Ceriotti, G., Garrido-Sanz, D., Borisov, S.M., Berg, J.S., Keel, C., de Anna, P., Keiluweit, M. (2026).
https://doi.org/10.1111/nph.71109
The MicrobeAtlas database: Global trends and insights into Earth’s microbial ecosystems
Matias Rodrigues, J.F., Tackmann, J., Malfertheiner, L., Patsch, D., Perez-Molphe-Montoya, E., Näpflin, N., Gaio, D., Rot, G., Danaila, M., Peluso, M.E., Dmitrijeva, M., Schmidt, T.S.B., von Mering, C. (2026).
https://doi.org/10.1016/j.cell.2026.01.021
Coral microbiomes as reservoirs of unknown genomic and biosynthetic diversity
Wiederkehr, F., Paoli, L., Richter, D., et al. (2026).
https://doi.org/10.1038/s41586-026-10159-6
LCMSpector: A simple open-source viewer for targeted hyphenated mass spectrometry analysis
Fido, M., Hoesli, E., Cappio Barazzone, E., Zenobi, R., Slack E. (2025).
https://doi.org/10.1371/journal.pcbi.1013095
One Health, One Microbiome
Muhummed, A.M., Lanker, K.C., Yersin, S., Zinsstag, J., Vonaesch, P. (2025).
https://doi.org/10.1038/s41467-025-64115-5
Habitat filtering more than microbiota origin controls microbiome transplant outcomes in soil
Causevic, S., Tackmann, J., Sentchilo, V., Malfertheiner, L., Von Mering, C., van der Meer, J. R. (2025).
https://doi.org/10.1093/ismejo/wraf162
High-throughput cultivation and isolation of environmental anaerobes using selectively permeable hydrogel capsules
Sallet, H., Calvo, M., Titus, M., Jacquemin, N., Lederballe Meibom, K., Bernier-Latmani, R. (2025).
https://doi.org/10.1093/ismeco/ycaf117
Seed-borne bacteria drive wheat rhizosphere microbiome assembly via niche partitioning and facilitation
Garrido-Sanz, D., Keel, C. (2025).
https://doi.org/10.1038/s41564-025-01973-1
Disentangling the feedback loops driving spatial patterning in microbial communities
Henderson, A., Del Panta, A., Schubert, O. T., Mitri, S., van Vliet, S. (2025).
doi.org/10.1038/s41522-025-00666-1
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