Publications

Community standards and future opportunities for synthetic communities in plant–microbiota research

Northen, T. R., Geldner, N., Schulze-Lefert, P., Vorholt, J., Garrido-Oter, R., et al. (2024).

https://doi.org/10.1038/s41564-024-01833-4

A framework for understanding collective microbiome metabolism

Huelsmann, M., Schubert, O. T., Ackermann, M. (2024).

https://doi.org/10.1038/s41564-024-01850-3

Inferring bacterial interspecific interactions from microcolony growth expansion

Miguel Trabajo, T., Guex, I., Dubey, M., Sarton-Lohéac, E., Todorov, H., Richard, X., Mazza, C., van der Meer, J. R. (2024).

https://doi.org/10.1093/femsml/uqae020

Artificial selection improves pollutant degradation by bacterial communities

Arias-Sánchez, F. I., Vessmann, B., Haym, A., Alberti, G., Mitri, S. (2024).

https://doi.org/10.1038/s41467-024-52190-z

Fragmented micro-growth habitats present opportunities for alternative competitive outcomes

Batsch, M., Guex, I., Todorov, H., Heiman, C. M., Vacheron, J., Vorholt, J., Keel, C., van der Meer, J. R. (2024).

https://doi.org/10.1038/s41467-024-51944-z

Expanding the Pseudomonas diversity of the wheat rhizosphere: four novel species antagonizing fungal phytopathogens and with plant-beneficial properties

Poli, N., Keel, C., Garrido-Sanz, D. (2024).

https://doi.org/10.3389/fmicb.2024.1440341

Natural plant disease suppressiveness in soils extends to insect pest control

Harmsen, N., Vesga, P., Glauser, G., Klötzli, F., Heiman, C. M., Altenried, A., Vacheron, J., Muller, D., Moënne-Loccoz, Y., Steinger, T., Keel C., Garrido-Sanz, D. (2024).

https://doi.org/10.1186/s40168-024-01841-w

Niche availability and competitive loss by facilitation control proliferation of bacterial strains intended for soil microbiome interventions

Causevic, S., Dubey, M., Morales, M., Salazar, G., Sentchilo, V., Carraro, N., Ruscheweyh, H.-J., Sunagawa, S., van der Meer, J. R. (2024).

https://doi.org/10.1038/s41467-024-46933-1

Assessing microbiome population dynamics using wild-type isogenic standardized hybrid (WISH)-tags

Daniel, B. B. J., Steiger, Y., Sintsova, A., Field, C. M., Nguyen, B. D., Schubert, C., Cherrak, Y., Sunagawa, S., Hardt, W.-D., Vorholt, J. A. (2024).

https://doi.org/10.1038/s41564-024-01634-9

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