Publications

Environment-Organism Feedbacks Drive Changes in Ecological Interactions
Meacock, O. J., Mitri, S. (2025).
https://doi.org/10.1111/ele.70027
Soil microbiome interventions for carbon sequestration and climate mitigation
Beattie, G. A., Edlund, A., van der Meer, J. R., et al. (2024).
https://doi.org/10.1128/msystems.01129-24
Plant microbiota feedbacks through dose-responsive expression of general non-self response genes
Keppler, A., Roulier, M., Pfeilmeier, S., Petti, G. C., Sintsova, A., Vorholt, J., et al. (2024).
https://doi.org/10.1038/s41477-024-01856-z
Salmonella Typhimurium screen identifies shifts in mixed-acid fermentation during gut colonization
Nguyen, B. D., Sintsova, A., Schubert, C., Slack, E., Vorholt, J, Sunagawa, S., Hardt, W.-D., et al. (2024).
https://doi.org/10.1016/j.chom.2024.08.015
Community standards and future opportunities for synthetic communities in plant–microbiota research
Northen, T. R., Geldner, N., Schulze-Lefert, P., Vorholt, J., Garrido-Oter, R., et al. (2024).
https://doi.org/10.1038/s41564-024-01833-4
A framework for understanding collective microbiome metabolism
Huelsmann, M., Schubert, O. T., Ackermann, M. (2024).
https://doi.org/10.1038/s41564-024-01850-3
Inferring bacterial interspecific interactions from microcolony growth expansion
Miguel Trabajo, T., Guex, I., Dubey, M., Sarton-Lohéac, E., Todorov, H., Richard, X., Mazza, C., van der Meer, J. R. (2024).
https://doi.org/10.1093/femsml/uqae020
Artificial selection improves pollutant degradation by bacterial communities
Arias-Sánchez, F. I., Vessmann, B., Haym, A., Alberti, G., Mitri, S. (2024).
https://doi.org/10.1038/s41467-024-52190-z
Fragmented micro-growth habitats present opportunities for alternative competitive outcomes
Batsch, M., Guex, I., Todorov, H., Heiman, C. M., Vacheron, J., Vorholt, J., Keel, C., van der Meer, J. R. (2024).
https://doi.org/10.1038/s41467-024-51944-z
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