Publications

From microbiome composition to functional engineering, one step at a time
Burz, S. D., Causevic, S., Dal Co, A., Dmitrijeva, M., Vonaesch, P., Vorholt, J., et al. (2023).
https://doi.org/10.1128/mmbr.00063-23
Evolutionary and ecological role of extracellular contractile injection systems: from threat to weapon
Heiman, C. M., Vacheron, J., Keel, C. (2023).
https://doi.org/10.3389/fmicb.2023.1264877
Molecular and evolutionary basis of O-antigenic polysaccharide-driven phage sensitivity in environmental pseudomonads
Vacheron, J., Heiman, C. M., Garneau, J. R., Kupferschmied, P., de Jonge, R., Garrido-Sanz, D., Keel, C. (2023).
https://doi.org/10.1128/spectrum.02049-23
Changes in structure and assembly of a species-rich soil natural community with contrasting nutrient availability upon establishment of a plant-beneficial Pseudomonas in the wheat rhizosphere
Garrido-Sanz, D., Causevic, S., Vacheron, J., Heiman, C. M., Sentchilo, V., van der Meer J. R., Keel, C. (2023).
https://doi.org/10.1186/s40168-023-01660-5
Metabolic interaction models recapitulate leaf microbiota ecology
Schäfer, M., Pacheco, A., Künzler, R., Bortfeld-Miller, M., Field, C. M., Vayena, E., Hatzimanikatis, V., Vorholt, J. (2023).
https://doi.org/10.3929/ethz-b-000621167
Relation of pest insect-killing and soilborne pathogen-inhibition abilities to species diversification in environmental Pseudomonas protegens
Garrido-Sanz, D., Vesga, P., Heiman, C. M., Altenried, A., Keel, C., Vacheron, J. (2023).
https://doi.org/10.1038/s41396-023-01451-8
Resolving metabolic interaction mechanisms in plant microbiomes
Pacheco, A. R., Vorholt, J. A. (2023).
https://doi.org/10.1016/j.mib.2023.102317
Fitness-Conditional Genes for Soil Adaptation in the Bioaugmentation Agent Pseudomonas veronii 1YdBTEX2
Morales, M., Sentchilo, V., Carraro, N., Causevic, S., Vuarambon, D., van der Meer, J. R. (2023).
https://doi.org/10.1128/msystems.01174-22
Integrating plant and fungal quantitative genetics to improve the ecological and agricultural applications of mycorrhizal symbioses
McGale, E., Sanders, I. R. (2022).
https://doi.org/10.1016/j.mib.2022.102205
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