Publications

Recent advances in microbial community analysis from machine learning of multiparametric flow cytometry data
Özel Duygan, B. D., van der Meer, J. R. (2022).
https://doi.org/10.1016/j.copbio.2022.102688
The plant NADPH oxidase RBOHD is required for microbiota homeostasis in leaves
Pfeilmeier, S., Petti, G. C., Bortfeld-Miller, Daniel, B., Field, C. M., Sunagawa, S., Vorholt, J. A. (2021).
https://doi.org/10.1038/s41564-021-00929-5
A general non-self response as part of plant immunity
Maier, B. A., Kiefer, P., Fiel, C. M., Hemmerle, L., Bortfeld-Miller, M., Emmenegger, B., Schäfer, M., Pfeilmeier, S., Sunagawa, S., Vogel, C. M., Vorholt, J. A. (2021).
https://doi.org/10.1038/s41477-021-00913-1
Environmental connectivity controls diversity in soil microbial communities
Dubey, M., Hadadi, N., Pelet, S., Carraro, N., Johnson, D. R., van der Meer, J. R. (2021).
doi: 10.1038/s42003-021-02023-2
Live cell dynamics of production, explosive release and killing activity of phage tail-like weapons for Pseudomonas kin exclusion
Vacheron, J., Heiman, C. M., Keel, C. (2021).
https://doi.org/10.1038/s42003-020-01581-1
Variability in arsenic methylation efficiency across aerobic and anaerobic microorganisms
Viacava, K., Lederballe Meibom, K., Ortega, D., Dyer, S., Gelb, A., Falquet, L., Minton, N.P., Mestrot, A., Bernier-Latmani (2020).
doi: 10.1021/acs.est.0c03908
Rapid detection of microbiota cell type diversity using machine-learned classification of flow cytometry data
Özel Duygan, B.D., Hadadi, N., Farizah Babu, A., Seyfried, M., van der Meer, J.R. (2020).
doi: 10.1038/s42003-020-1106-y
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