Publications

Vaccine-enhanced competition permits rational bacterial strain replacement in the gut
Lentsch, V., Woller, A., Rocker, A., Hardt, W.-D., Loverdo, C., Diard, M., Slack, E., et al. (2025).
DOI: 10.1126/science.adp5011
Sublethal systemic LPS in mice enables gut-luminal pathogens to bloom through oxygen species-mediated microbiota inhibition
Kroon, S., Malcic, D., Weidert, L., Sunagawa, S., Vorholt, J. A., Maier, L., Lacroix, C., Hausmann, A., Hardt, W.-D., et al. (2025).
https://doi.org/10.1038/s41467-025-57979-0
Host specificity of gut microbiota associated with social bees: patterns and processes
Mazel, F., Prasad, A., Engel, P. (2025).
https://doi.org/10.1128/mmbr.00080-23
Metabolic network reconstruction as a resource for analyzing Salmonella Typhimurium SL1344 growth in the mouse intestine
Vayena, E., Fuchs, L., Mohammadi Peyani, H., Lagoda, K., Nguyen, B., Hardt, W.-D., Hatzimanikatis, V. (2025).
https://doi.org/10.1371/journal.pcbi.1012869
Neutrophil recruitment during intestinal inflammation primes Salmonella elimination by commensal E. coli in a context-dependent manner
Cherrak, Y., Abi Younes, A., Perez-Molphe-Montoya, E., Vorholt, J. A., Von Mering, C., Hardt, W.-D., et al. (2025).
https://doi.org/10.1016/j.chom.2025.02.004
Salmonella Typhimurium screen identifies shifts in mixed-acid fermentation during gut colonization
Nguyen, B. D., Sintsova, A., Schubert, C., Slack, E., Vorholt, J, Sunagawa, S., Hardt, W.-D., et al. (2024).
https://doi.org/10.1016/j.chom.2024.08.015
Genomic and phenotypic imprints of microbial domestication on cheese starter cultures
Sommerville, V., Thierer, N., Mazel, F., Engel, P., et al. (2024).
https://doi.org/10.1038/s41467-024-52687-7
Non-canonical start codons confer context-dependent advantages in carbohydrate utilization for commensal E. coli in the murine gut
Cherrak, Y., Salazar, M. A., Näpflin, N., Malfertheiner, L., Herzog, M., Schubert, C., Von Mering., C., Hardt, W.-D. (2024).
https://doi.org/10.1038/s41564-024-01775-x
Fecal transplant allows transmission of the gut microbiota in honey bees
Cabirol, A., Chhun, A., Liberti, J., Kesner, L., Neuschwander, N., Schaerli, Y., Engel, P. (2024).
https://doi.org/10.1128/msphere.00262-24
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