Publications

Mild chronic exposure to pesticides alters physiological markers of honey bee health without perturbing the core gut microbiota
Almasri, H., Liberti, J., Brunet, J.-L., Engel, P., Belzunces, L. P. (2022).
https://doi.org/10.1038/s41598-022-08009-2
Functional strain redundancy and persistent phage infection in Swiss hard cheese starter cultures
Somerville, V., Berthoud, H., Schmidt, R. S., Bachmann, H.-P., Meng, Y. H., Fuchsmann, P., von Ah, U., Engel, P. (2021).
https://doi.org/10.1038/s41396-021-01071-0
Microbiota-derived metabolites inhibit Salmonella virulent subpopulation development by acting on single-cell behaviors
Hockenberry, A. M., Micali, G., Takàcs, G., Weng, J., Hardt, W.-D., Ackermann, M. (2021).
https://doi.org/10.1073/pnas.2103027118
Niche partitioning facilitates coexistence of closely related honey bee gut bacteria
Brochet, S., Quinn, A., Mars, R. A. T., Neuschwander, N., Sauer, U., Engel, P. (2021).
doi: 10.7554/eLife.68583
A rationally designed oral vaccine induces immunoglobulin A in the murine gut that directs the evolution of attenuated Salmonella variants
Diard, M., Bakkeren, E., [...], Hardt, W.-D., Slack, E. (2021).
https://doi.org/10.1038/s41564-021-00911-1
High throughput sequencing provides exact genomic locations of inducible prophages and accurate phage-to-host ratios in gut microbial strains
Zünd, M., Ruscheweyh, H.-J., Field, C. M., Meyer, N., Cuenca, M., Hoces, D., Hardt, W.-D., Sunagawa, S. (2021).
https://doi.org/10.1186/s40168-021-01033-w
Elucidating host–microbe interactions in vivo by studying population dynamics using neutral genetic tags
Hausmann, A., Hardt, W.-D. (2020).
doi: 10.1111/imm.13266
Epithelial inflammasomes in the defense against Salmonella gut infection
Fattinger, S.A., Sellin, M.E., Hardt, W.-D. (2021).
doi: 10.1016/j.mib.2020.09.014
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